Special Issue on  Computational biology: More than just a set of techniques January 2007

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Foreword

 

Computational biology: More than just a set of techniques

N Srinivasan, R Sowdhamini and Alok Bhattacharya


1-2
Articles

 

Simple sequence repeats in mycobacterial genomes

Vattipally B Sreenu, Pankaj Kumar, Javaregowda Nagaraju and Hampapathalu A Nagarajaram
For Supplementary Material only


3-15

Sequence and recombination analyses of the geminivirus replication initiator protein

T Vadivukarasi, K R Girish and R Usha


17-29

A hybrid approach for predicting promiscuous MHC class I restricted T cell epitopes

Manoj Bhasin and G P S Raghava

31-42

Genome inventory and analysis of nuclear hormone receptors in Tetraodon nigroviridis

Raghu Prasad Rao Metpally, Ramakrishnan Vigneshwar and Ramanathan Sowdhamini
For Supplementary Material only

43-50

"Pinning strategy": a novel approach for predicting the backbone structure in terms of protein blocks from sequence

A G de Brevern, C Etchebest, C Benros and S Hazout


51-70

ProRegIn: A regularity index for the selection of native-like tertiary structures of proteins

Lipi Thukral, Sandhya R Shenoy, Kumkum Bhushan and B Jayaram
For Supplementary Material only

71-81

Comparison of sequence-based and structure-based phylogenetic trees of homologous proteins: Inferences on protein evolution

S Balaji and N Srinivasan

83-96

SURF'S UP! – Protein classifi cation by surface comparisons

Joanna M Sasin, Adam Godzik and Janusz M Bujnicki

97-100

Peptide segments in protein-protein interfaces

Arumay Pal, Pinak Chakrabarti, Ranjit Bahadur, Francis Rodier and Joël Janin

101-111

Modelling and simulation of signal transductions in an apoptosis pathway by using timed Petri nets

Chen Li, Qi-Wei Ge, Mitsuru Nakata, Hiroshi Matsuno and Satoru Miyano

113-127

Dynamic causal models of neural system dynamics: current state and future extensions

Klaas E Stephan, Lee M Harrison, Stefan J Kiebel, Olivier David, Will D Penny and Karl J Friston

129-144

Formal TCA cycle description based on elementary actions

Pierre Mazière, Nicolas Parisey, Marie Beurton-Aimar and Franck Molina

145-155

Modelling spatio-temporal interactions within the cell

Padmini Rangamani and Ravi Iyengar

157-167

Integrative content-driven concepts for bioinformatics "beyond the cell"

Edgar Wingender, Torsten Crass, Jennifer D Hogan, Alexander E Kel, Olga V Kel-Margoulis, and Anatolij P Potapov

169-180

 

Indexed in CURRENT CONTENTS
                 CABS (Current Awareness in Biological Sciences)
                 Geo Abstracts
                 GEOBASE
                 EMBASE/Excerpta Medica
                 Index Medicus and MEDLINE

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